Computational Biology Work
Methods that can be inspected and repeated.
Public codon-analysis scripts; broader workflows documented as available
The project
Bioinformatics scripts and analysis workflows for sequence data, codon usage, and comparative biological questions.
The motivation
Reproducibility makes a computational claim open to inspection. Recording inputs, filtering choices, parameters, and environments allows an analysis to be revisited and its assumptions tested.
Scope & direction
The public Codon-Bias repository provides Python and R scripts for genome acquisition, coding-sequence extraction, RSCU, chi-square tests, residuals, and ENC–GC3 analysis. Broader comparative-genomics, phylogenomics, RNA-seq, and HPC workflows are areas of work; they are not presented as a released public toolkit.
Development status
Public codon-analysis scripts; broader workflows documented as available